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bgen

BGEN is a BGEN parser for golang. It can read files in the .bgen format, but it cannot write them.

This package supports reading phased and unphased data for BGEN specifications 1.1, 1.2, and 1.3.

Installation

go get github.com/carbocation/bgen

Requirements

For BGEN specifications 1.1, 1.2, and 1.3 this package is immediately usable after go get.

API

The API is under active development and the public API may change for now.

For the current API, please see the BGEN Godoc

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BGEN file format reader for parsing UK Biobank and other genotype data in Go

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